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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940602.1_cds_XP_016484744.1_75733
CDS Infomation

[gene=LOC107805260] [db_xref=GeneID:107805260] [protein=sister chromatid cohesion protein PDS5 homolog A-like isoform X5] [protein_id=XP_016484744.1] [location=complement(join(63585..63617,64431..64501,65234..65328,66435..66463,81223..81271,81347..81414,81481..81963,82058..82141,82232..82369,82457..82604,82672..82865,82942..83076,84256..84376,85488..85630))] [gbkey=CDS]
Sequence

ATGCAGATTTTTGGGCTCAAGACGCTAGTCCGGAGCTTTTTGCCCCATCAAAGTGCAGCT
GTCAGTCGTCCAATTAACTTTTTACTGGATATTATACTGGAAATGCTTCAGAAGGGTGAT
TTTTATGGTGGTAGTATCTCAAGCAGTGATTCTGACAAGACTCATATTAGATTAGCTGCT
GCAAAGTCCGTTCTTCAGCTCTCAAGAAGGTGGGATTCACTCATTTCACCACAACTTTTC
CGCTGCACGGTTTTGACGGCCAAGGATAATTCTCCTCTAGTACAGAGACTGTTTGTTAAG
AAGGTGCAAAAGCTTTTGAGGGAGCATAAGATCCCTTGTAGATATGCATGTGCATTTCCA
TTTGCTGCCACAGACTCTCCAGAAGATCTACAACAAATTTCTTTGAAGTACATGGAAGAA
TTTGTACAGGAATATGGAAATACAGCAAGAATAAATCAAATATCTACAATGCCTGGACAT
GTGACTGGTCTTCCTGTTTACGTAGTGGTTTTCTTGATCCACATCCTAGCTCATGATCCA
AATTTTCCCACTGCTGATCATCATGATGCCAACTTCTGTGTTCAGTTTTTCAGTCCACTT
GTTTTCAGCTTGCAGGCGTTGGTTGATTTTAATTGCTCTGATGGCACTGTGGACCTCATT
AGTAAAGCTATTTCATACTTGAGAAGCATCTTCCATGCTATAAAAAAAGCAGAGGATGCT
GTTGATGCACAAATTACACCTAAGCTTCATGTTTTGTCAGATATTGGGATTTCTTTGTTG
GATGCAATAGGTAACACACGCGTCTCTCGTTCACATATCCCTGGACTTATTTTGCTACCA
TCTTCACTGTATAAAGTGGGTCAAAAACATATTAGTCAGGGAAACAGTGATCTTTTAATT
CGTTTTCACCAAGATGAAAGTTTCATTAGGAAATTACTTGATAGTTCGAAAAATAAAGCT
CAAACTGCTGGCTCCATTAATGCACCAAACCAAAAATGTCAAGATGGCATGACTCGGTCA
GGTAACAGTGGGGGCAGCAAATTGGAAATGCAATTTTGCAAAAAGGGACCTCTTCCGTTG
AGCATCATAAAAGAGAAATATTCAGATAAGGAAGAGTTAAGTGAAACTTCAAACCAAGAG
CTCGATACTAGAGAAAGACAAAAAACATCTGAACCATGTTCAGCTTCTGCATCATTTGAA
TTACATAAGGAGTTTTCGATTGACGATGAACATGAAGATGATGCACATGGAGCCATTGAA
GCAGTGATTAGAACTGAGCATCTTCCATATCATTCAAGAACTCGCAGTTCACGACCCTTG
TCTGATAAGAAGGATGAACATCCATGTTCTCTAAAAGAAAAAGAGACAATCTCAAGATGT
CAAACAATTATGCGTGAGCGTTACAAATCCGTGAAAGGCAACAGCTCAGATATTCCCATC
TCAAAGGAAAGCAAAAATAAAGGTGAAAAGTTAATCAGGCAGCAAATAGAACTGTGCTCT
TCCGAGGATAAATGTTGTTCTGGAAGCACAGAGGCTTTCGATTCTAGCGACAACACTCTC
AAGGATTCCTGTGGTCTGCAATCACGGTGCTGGAAAAGTGGTGACATGATTGGATATGTC
TCTCAACAAGAAGCTGACTTGTCAAAGGATGAAGCTACTTTTGGTAGTAAAAAGACTGCT
TTAGCTGAAATAAAGAAGCGGGGTAGTGTTCTTGTTGACTCATCACTTTCTGAAGTCATT
AATGTGAATGAGGATCCCATTGCCCGAAGGACTCGAAGTCGGAGAGGTTGA

Peptide Sequence

PEP ID

XP_016484744.1
PEP Infomation

PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Nicotiana tabacum]
Sequence

MQIFGLKTLVRSFLPHQSAAVSRPINFLLDIILEMLQKGDFYGGSISSSDSDKTHIRLAA
AKSVLQLSRRWDSLISPQLFRCTVLTAKDNSPLVQRLFVKKVQKLLREHKIPCRYACAFP
FAATDSPEDLQQISLKYMEEFVQEYGNTARINQISTMPGHVTGLPVYVVVFLIHILAHDP
NFPTADHHDANFCVQFFSPLVFSLQALVDFNCSDGTVDLISKAISYLRSIFHAIKKAEDA
VDAQITPKLHVLSDIGISLLDAIGNTRVSRSHIPGLILLPSSLYKVGQKHISQGNSDLLI
RFHQDESFIRKLLDSSKNKAQTAGSINAPNQKCQDGMTRSGNSGGSKLEMQFCKKGPLPL
SIIKEKYSDKEELSETSNQELDTRERQKTSEPCSASASFELHKEFSIDDEHEDDAHGAIE
AVIRTEHLPYHSRTRSSRPLSDKKDEHPCSLKEKETISRCQTIMRERYKSVKGNSSDIPI
SKESKNKGEKLIRQQIELCSSEDKCCSGSTEAFDSSDNTLKDSCGLQSRCWKSGDMIGYV
SQQEADLSKDEATFGSKKTALAEIKKRGSVLVDSSLSEVINVNEDPIARRTRSRRG

Transcript Sequence

Gene sequence data has not been registered.